I feel like an idiot...
well that small red wire was hooked up to one of the 2 terminals on the starter as well as the small brown and the big red wire. I know where those two go, just not the small red one. I think it goes with the big red wire that runs from the battery to the starter because the FSM says that the wire goes to the battery. Only the book says it is black, but the path has it running with the brown wire from the relay on the firewall.