Brake pedal goes to floor with engine running

This past weekend I finally got a chance to work on the brakes. I changed the mastercylinder, bought a new one. I bench bled it according to instructions. Installed it and bled all 4 corners following the correct sequence and using a mighty vac bleeder. I checked the vacuum to the booster, good vacuum. Booster holds vacuum after truck is shut off. Rapid pumping does not make the engine stumble as far as I can tell. Brakes still are not very good. Rear brakes are adjusted properly. Pedal goes way down to the floor. If I had to stop in emergency situation I would have to push pedal with extreme force. MC is for W250 with 3500lb front axle and so are the new calipers. Anybody have an ideas? Air in lines somehow? Booster junk? This thing is kicking my a$$ right now. Thanks for the help guys.