New Clutch.....Problems

Here are pics of the assembly. As I recall the disc has a marking "Fly Wheel Side" on it as most disc's do. Looking at the pics I do not see that marking so I believe that it is in correctly. The throw out bearing came with the clutch kit, so it is new. I bought the set up from Rock Auto looking for just a stock clutch.
When I was installing transmission, I had some trouble getting it aligned up and it took me several attempts to finally get it in. I'm hoping that I did not damage the disc trying to find the center of the hole.

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