I am trying to visualize the crush of just solder strips without gaskets in a vee interface and am thinking this might be inaccurate if you don't very carefully put equal torque on each bolt; it seems too easy to push the intake off one side or the other. Witht he gaskets, I think I would get some very thin electronics solder; plumbers solder seems to thick.
This is odd sounding.... sounds like you have pistons like the Speed Pro L2316's... what pistons DO you have? Is this without a head gasket in-between head and block? Even then, this sounds odd... How much has the deck been cut so far, if any? Standard early 340 pistons stick around .018" above the deck and the open chambers should clear around them.
Not sure how to answer this....