Any reason you want to go to the Pertronix? I have one in the shop right now and I'm not all that impressed. Maybe after I spin it up I will be, but the Chrysler distributor is pretty hard to beat.
About the original question..I'm on the fence about a bigger alternator. Modern ignition boxes use a good amount of power and I suspect at lower RPM's I'm no powering the box enough.
I'm not all that anxious to bypass the ammeter if I can avoid it.