Trunk Mount Battery - Wire Routing

I wanted direct runs to the battery for those items instead of tying them in somewhere.
When the alternator is producing enough power at 14 Volts, then that's the power source.
The advantage of tying in close to or after the battery is:
a. times when the battery is the power source
b. equipment that may be sensitive to the electrical noise from the alternator.
I'm not the one to explain how a battery can dampen out some of that noise but accept it as realty.
With EFI and an AMP, your strategy is probably a good one.
Just make sure the alternator output line can carry the currents for that stuff and maximum battery charging without much resistance.