Valve truble

Put a straight edge across the valves.
If running adjustable rockers, while far from ideal....... personally I’d say if the tips are within about .040, at this stage of the game I’d say “run it”.
I’d prefer to have the springs set up pretty close if possible.

The HD valve and the std valve are very close to each other in OAL(the HD valves are actually .011” shorter).
If the tips are pretty far off each other from intake to exhaust...... that’s more likely related to the seat work(valve job).
From the factory, the tip heights for the HD ex valves are the same as the intakes.