Exposed body filler on new paint?

I noticed that the inside of the holes for the duster emblems did not get hit with the paint real well (the inside of the holes) which is made of a thin peice of body filler, and you can see the body filler. I hope I am making sense. I have not put the emblems in yet, because a peg broke on one, and I still need a third. What do I do??? I would hate it if water could get soaked in there and cause a problem. Kind of worries me now that I think about it.